{
  "_id": "6a6720371cb44dc1da8d8ae5",
  "Package": "CentroidR",
  "Title": "CentroidR",
  "Version": "0.0.0.9003",
  "Authors@R": "c(\nperson(given = \"Adriano\",\nfamily = \"Rutz\",\nemail = \"adafede@gmail.com\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0003-0443-9902\")),\nperson(given = \"Johannes\",\nfamily = \"Rainer\",\nemail = \"Johannes.Rainer@eurac.edu\",\nrole = \"aut\",\ncomment = c(ORCID = \"0000-0002-6977-7147\"))\n)",
  "Maintainer": "Adriano Rutz <adafede@gmail.com>",
  "Description": "CentroidR provides the infrastructure to centroid profile\nspectra.",
  "License": "AGPL (>= 3)",
  "URL": "https://github.com/adafede/CentroidR,\nhttps://adafede.github.io/CentroidR",
  "BugReports": "https://github.com/adafede/CentroidR/issues",
  "ByteCompile": "TRUE",
  "Collate": "'CentroidR-package.R' 'centroid_one_file.R'",
  "Config/roxygen2/markdown": "TRUE",
  "Config/roxygen2/version": "8.0.0",
  "Config/testthat/edition": "3",
  "Encoding": "UTF-8",
  "Language": "en-US",
  "biocViews": "centroiding, spectra",
  "Config/pak/sysreqs": "cmake make libuv1-dev libnetcdf-dev libssl-dev",
  "Repository": "https://adafede.r-universe.dev",
  "Date/Publication": "2026-07-27 06:35:52 UTC",
  "RemoteUrl": "https://github.com/adafede/CentroidR",
  "RemoteRef": "main",
  "RemoteSha": "961c2a68a90cc3a8c3f8365e9a0eff274c071470",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-07-27 09:05:27 UTC",
    "User": "root"
  },
  "Author": "Adriano Rutz [aut, cre] (ORCID:\n<https://orcid.org/0000-0003-0443-9902>),\nJohannes Rainer [aut] (ORCID: <https://orcid.org/0000-0002-6977-7147>)",
  "_user": "adafede",
  "_type": "src",
  "_file": "CentroidR_0.0.0.9003.tar.gz",
  "_fileid": "https://r2.ropensci.org/aa12e3a2489488a4f56e2042473c0a0e5c98f10a8ccfcca7fc2f42930a65ab72",
  "_filesize": 143826,
  "_sha256": "aa12e3a2489488a4f56e2042473c0a0e5c98f10a8ccfcca7fc2f42930a65ab72",
  "_expires": "2026-11-04T09:09:09.000Z",
  "_created": "2026-07-27T09:05:27.000Z",
  "_published": "2026-07-27T09:09:10.977Z",
  "_jobs": [
    {
      "job": 89933384249,
      "time": 186,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8647591299"
    },
    {
      "job": 89933384245,
      "time": 154,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8647576605"
    },
    {
      "job": 89933384305,
      "time": 111,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8647558474"
    },
    {
      "job": 89933384274,
      "time": 105,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8647555894"
    },
    {
      "job": 89932651002,
      "time": 198,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8647510467"
    },
    {
      "job": 89933384287,
      "time": 169,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8647582838"
    },
    {
      "job": 89933384419,
      "time": 106,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8647556984"
    },
    {
      "job": 89933384313,
      "time": 116,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8647561613"
    },
    {
      "job": 89933384283,
      "time": 117,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8647562325"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/adafede/actions/runs/30252209046",
  "_status": "success",
  "_upstream": "https://github.com/adafede/CentroidR",
  "_commit": {
    "id": "961c2a68a90cc3a8c3f8365e9a0eff274c071470",
    "author": "Adriano Rutz <44283913+Adafede@users.noreply.github.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Update external-use.yaml",
    "time": 1785134152
  },
  "_maintainer": {
    "name": "Adriano Rutz",
    "email": "adafede@gmail.com",
    "login": "adafede",
    "mastodon": "@adafede@mastodon.online",
    "linkedin": "in/adrianorutz",
    "orcid": "0000-0003-0443-9902",
    "description": "Pharmaceutical Scientist | Computational Metabolomics",
    "uuid": 44283913
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.5.0",
      "role": "Depends"
    },
    {
      "package": "BiocParallel",
      "version": ">= 1.44.0",
      "role": "Imports"
    },
    {
      "package": "logger",
      "version": ">= 0.4.2",
      "role": "Imports"
    },
    {
      "package": "MsCoreUtils",
      "version": ">= 1.22.1",
      "role": "Imports"
    },
    {
      "package": "mzR",
      "version": ">= 2.44.0",
      "role": "Imports"
    },
    {
      "package": "optparse",
      "version": ">= 1.8.2",
      "role": "Imports"
    },
    {
      "package": "purrr",
      "version": ">= 1.2.2",
      "role": "Imports"
    },
    {
      "package": "Spectra",
      "version": ">= 1.20.1",
      "role": "Imports"
    },
    {
      "package": "altdoc",
      "version": ">= 0.7.2",
      "role": "Suggests"
    },
    {
      "package": "BiocManager",
      "version": ">= 1.30.27",
      "role": "Suggests"
    },
    {
      "package": "BiocVersion",
      "version": ">= 3.22.0",
      "role": "Suggests"
    },
    {
      "package": "grateful",
      "version": ">= 0.3.0",
      "role": "Suggests"
    },
    {
      "package": "R.utils",
      "version": ">= 2.13.0",
      "role": "Suggests"
    },
    {
      "package": "rlang",
      "version": ">= 1.2.0",
      "role": "Suggests"
    },
    {
      "package": "spelling",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.3.2",
      "role": "Suggests"
    }
  ],
  "_owner": "adafede",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-31",
      "n": 2
    },
    {
      "week": "2025-32",
      "n": 1
    },
    {
      "week": "2025-33",
      "n": 7
    },
    {
      "week": "2025-34",
      "n": 13
    },
    {
      "week": "2025-36",
      "n": 1
    },
    {
      "week": "2025-39",
      "n": 3
    },
    {
      "week": "2025-40",
      "n": 3
    },
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2025-45",
      "n": 2
    },
    {
      "week": "2025-46",
      "n": 2
    },
    {
      "week": "2025-47",
      "n": 1
    },
    {
      "week": "2025-49",
      "n": 2
    },
    {
      "week": "2025-50",
      "n": 3
    },
    {
      "week": "2025-51",
      "n": 2
    },
    {
      "week": "2026-01",
      "n": 2
    },
    {
      "week": "2026-10",
      "n": 3
    },
    {
      "week": "2026-11",
      "n": 1
    },
    {
      "week": "2026-14",
      "n": 1
    },
    {
      "week": "2026-15",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    },
    {
      "week": "2026-19",
      "n": 2
    },
    {
      "week": "2026-21",
      "n": 3
    },
    {
      "week": "2026-22",
      "n": 7
    },
    {
      "week": "2026-23",
      "n": 2
    },
    {
      "week": "2026-24",
      "n": 5
    },
    {
      "week": "2026-25",
      "n": 1
    },
    {
      "week": "2026-26",
      "n": 1
    },
    {
      "week": "2026-27",
      "n": 3
    },
    {
      "week": "2026-28",
      "n": 1
    },
    {
      "week": "2026-29",
      "n": 8
    },
    {
      "week": "2026-30",
      "n": 16
    },
    {
      "week": "2026-31",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "0.0.0.9001",
      "date": "2025-09-25"
    }
  ],
  "_topics": [
    "centroiding",
    "spectra",
    "centroid",
    "mass-spectra",
    "mass-spectrometry"
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "adafede",
      "count": 196,
      "uuid": 44283913
    }
  ],
  "_userbio": {
    "uuid": 44283913,
    "type": "user",
    "name": "Adriano Rutz",
    "followers": 71,
    "description": "Pharmaceutical Scientist | Computational Metabolomics"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/CentroidR"
  },
  "_devurl": "https://github.com/adafede/centroidr",
  "_pkgdown": "https://adafede.github.io/CentroidR",
  "_searchresults": 0,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/CentroidR.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "centroid_one_file"
  ],
  "_help": [
    {
      "page": "centroid_one_file",
      "title": "Centroid an mzML file with configurable parameters",
      "topics": [
        "centroid_one_file"
      ]
    }
  ],
  "_pkglogo": "https://github.com/adafede/CentroidR/raw/main/man/figures/logo.svg",
  "_readme": "https://github.com/adafede/CentroidR/raw/main/README.md",
  "_rundeps": [
    "BH",
    "Biobase",
    "BiocGenerics",
    "biocmake",
    "BiocParallel",
    "cli",
    "clue",
    "cluster",
    "codetools",
    "cpp11",
    "data.table",
    "dir.expiry",
    "filelock",
    "formatR",
    "fs",
    "futile.logger",
    "futile.options",
    "generics",
    "glue",
    "IRanges",
    "lambda.r",
    "lifecycle",
    "logger",
    "magrittr",
    "MASS",
    "MetaboCoreUtils",
    "MsCoreUtils",
    "mzR",
    "ncdf4",
    "optparse",
    "ProtGenerics",
    "purrr",
    "Rcpp",
    "Rhdf5lib",
    "rlang",
    "S4Vectors",
    "snow",
    "Spectra",
    "vctrs"
  ],
  "_score": 3.204119982655925,
  "_indexed": true,
  "_nocasepkg": "centroidr",
  "_universes": [
    "adafede"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.0.0.9003",
      "date": "2026-07-27T09:08:21.000Z",
      "distro": "resolute",
      "commit": "961c2a68a90cc3a8c3f8365e9a0eff274c071470",
      "fileid": "https://r2.ropensci.org/20537721a8e1ec196cc6ebdebc0e8cce15ee06a883db11edfdf7499dd2d12014",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/adafede/actions/runs/30252209046"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.0.0.9003",
      "date": "2026-07-27T09:07:57.000Z",
      "distro": "resolute",
      "commit": "961c2a68a90cc3a8c3f8365e9a0eff274c071470",
      "fileid": "https://r2.ropensci.org/bbbec66556386d69bc73d45d8b24e97afd04b5db720d9ad46f21078cd23109d1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/adafede/actions/runs/30252209046"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.0.0.9003",
      "date": "2026-07-27T09:07:09.000Z",
      "commit": "961c2a68a90cc3a8c3f8365e9a0eff274c071470",
      "fileid": "https://r2.ropensci.org/092361a3d942a132a34306bed0b1590dcff8c71009dd53a3710dfe6ece83458c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/adafede/actions/runs/30252209046"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.0.0.9003",
      "date": "2026-07-27T09:07:01.000Z",
      "commit": "961c2a68a90cc3a8c3f8365e9a0eff274c071470",
      "fileid": "https://r2.ropensci.org/15a536230457dc017bfc18c6b93aa32a96749cf7d22bd7827aaf2372f1cca44b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/adafede/actions/runs/30252209046"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.0.0.9003",
      "date": "2026-07-27T09:08:28.000Z",
      "commit": "961c2a68a90cc3a8c3f8365e9a0eff274c071470",
      "fileid": "https://r2.ropensci.org/a4d3149201e124604f74fa193a9b80524449ec1f02f3a5508b8631ec3968fdd2",
      "status": "success",
      "buildurl": "https://github.com/r-universe/adafede/actions/runs/30252209046"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.0.0.9003",
      "date": "2026-07-27T09:07:00.000Z",
      "commit": "961c2a68a90cc3a8c3f8365e9a0eff274c071470",
      "fileid": "https://r2.ropensci.org/46624e209a137986fe0cd4bf2716dbf46696391859b5e0977b27072b0223e5b3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/adafede/actions/runs/30252209046"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.0.0.9003",
      "date": "2026-07-27T09:07:11.000Z",
      "commit": "961c2a68a90cc3a8c3f8365e9a0eff274c071470",
      "fileid": "https://r2.ropensci.org/0b222e7491a3310b53aec3d093c14746885144ec1b9ba1d901d760c8e341e2d8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/adafede/actions/runs/30252209046"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.0.0.9003",
      "date": "2026-07-27T09:07:14.000Z",
      "commit": "961c2a68a90cc3a8c3f8365e9a0eff274c071470",
      "fileid": "https://r2.ropensci.org/a87b42b8d19eb02f87d6a6daa96d8b81ae30a5be7d56c2a92506020895e2898b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/adafede/actions/runs/30252209046"
    }
  ]
}